Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946268.1_cds_XP_016488489.1_79119
CDS Infomation

[gene=LOC107808470] [db_xref=GeneID:107808470] [protein=AP-1 complex subunit mu-2-like] [protein_id=XP_016488489.1] [location=complement(join(2024..2122,2751..2873,2963..3104,3364..3461,3575..3671,3859..3966,4853..4956,5048..5224,5311..5373,5450..5596,6526..6654))] [gbkey=CDS]
Sequence

ATGGCGGGTGCCACCTCGGCGCTGTTTCTTCTTGATATGAAAGGTAGATGCCTTATAAGT
CGTGACTATAGAGGCGATGTTTCTGCTCAACAAGTCGAGAAATTCTTTTCTAAGCTCCTC
GAGAAAGAGGGTGACGTAGAATCTCATGGACCAGTATGCTATGAAAATGGCGTGAATTAC
ATGTTTATACAACACAACAACATTTACCTGATGGCAGCATCGAGGCAGAATTCTAATGCT
GCTAGCCTCCTTTTCTTTCTACATCGTGTAGTTGATGTCTTTAAGCACTATTTTGAAGAA
CTGGAAGAGGAGTCTCTACGAGATAACTTTGTCGTTGTGTATGAATTGCTTGATGAAATG
ATGGACTTTGGTTACCCTCAATATACGGAAGCTAAGATTCTTAGTGAGTTTATCAAGACG
GATGCATACAGAATGGAAGTCACCCAGCACCCTCCAATGGCCGTGACAAATGCAGTTTCG
TGGCGCAGTGAGGGGGTATTTTATAAGAATAATGAAGTATATTTGGATGTGGTCGAACAT
GTTAATCTCCTTGTCAACAGCAACGGCCAGTCAATACGTTCTGAAGTTAACGGGGCGTTA
AAAATGAGAGCTTATTTGAGTGGCATGCCTGAGTGCAAGCTTGGGCTTAATGACAGATTA
ATATTGGAGGCTCAAGGTCGGCCTACCAAAGGCAAATCCATTGATTTGGATGATATCAAA
TTTCATCAGTGTGTGCGTTTGGCTCGTTTTGAAAATGATCGCACAATATCTTTTATACCT
CCTGATGGCTCATTTGATCTGATGACATATAGACTCAGTACTCAGGTGAAGCCACTGATT
TGGGTAGAAGCTCAAGTTGAAAGGCATTCAAGAAGCCGGGTTGAGATGTCTGTCAAAGCC
AGAAGCCAGTTTAAGGAGCGTAGCACTGCTATGAATGTGGAAATTGAGTTGCCTGTGCCA
TCTGATGCGATGAATCCCAATATACGAACTTCAATGGGATATGCTACATATGCTCCTGAG
AGAGATGCTGTGGTATGGAAAATCAAGTCATTTCCTGGTAATAAGGAGTATATGCTGAGG
GCAGAGTTTAGACTTCCAAGTGTAATATCTGAAGATACACCTCCTGATAGAAAAGCTCCA
ATCCGTGTTAAGTTTGAGATACCATATTTTACTGTCTCAGGAATTCAGGTTCGTTATCTC
AAAATTATTGAAAAAAGCGGATATCAAGCTCTTCCATGGGTGAGGTACAAAACAATGGCT
GGTGAGTACGAACTAAGGCTGGTATGA

Peptide Sequence

PEP ID

XP_016488489.1
PEP Infomation

PREDICTED: AP-1 complex subunit mu-2-like [Nicotiana tabacum]
Sequence

MAGATSALFLLDMKGRCLISRDYRGDVSAQQVEKFFSKLLEKEGDVESHGPVCYENGVNY
MFIQHNNIYLMAASRQNSNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM
MDFGYPQYTEAKILSEFIKTDAYRMEVTQHPPMAVTNAVSWRSEGVFYKNNEVYLDVVEH
VNLLVNSNGQSIRSEVNGALKMRAYLSGMPECKLGLNDRLILEAQGRPTKGKSIDLDDIK
FHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRVEMSVKA
RSQFKERSTAMNVEIELPVPSDAMNPNIRTSMGYATYAPERDAVVWKIKSFPGNKEYMLR
AEFRLPSVISEDTPPDRKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYKTMA
GEYELRLV

Transcript Sequence

Gene sequence data has not been registered.